lavaburst
Introduction
A probabilistic segmentation model for genomic interaction maps
Motivation
What’s in a domain?
Finding communities in a haystack
Restrict the search space
Theory
The segmentation path graph
A statistical ensemble
Algorithms
Optimal segmentation
Marginal probabilities
Sampling
Scoring systems
Extensivity
Log-odds scores
Potts energy model
Other scoring functions
Examples
Related Methodologies
Network community detection
Sequence alignment
Hidden Markov Models
Extensions
Gapped and local segmentation
Emission probabilities and inference
References
lavaburst
Docs
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Extensions
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Extensions
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Gapped and local segmentation
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Emission probabilities and inference
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